Final results, expressed as N-fold differences in target gene expression relative to the reference gene GAPDH, termed ‘Ntarget’, were determined as follows:Ntarget = 2(delta Ct sample – delta Ct reference gene). Where delta Ct values of the sample and reference were determined by subtracting the average Ct value of the test gene from the average Ct value

of the β-actin gene. The sequence of primer for three known human transketolase genes and β-actin were from reference.4. β-actin gene was amplified as internal control. The sequences of primers for TKT, TKTL1, TKTL2 were obtained by referring to Coy et al [9]. CH5183284 concentration The sequences of primers for β-actin gene: 5′-GTG CGT GAC ATT AAG GAG-3′(sense), 5′-CTA AGT CAT AGT CCG CCT-3′(antisense) were designed by using Primer Premier www.selleckchem.com/products/ro-61-8048.html 5.0 software package. The amplification conditions: denaturing at 94°C for 3 min, 40 cycles at 94°C for 5 s and at 57°C for 5 s. The amplification products were visualized by electrophoresis on a 1.5% agarose gel stained with ethidium bromide. Measurements of transketolase activity In order to prepare the extract of HeLa and End1/E6E7 cells, cells were sonicated and centrifuged. The resulting supernatant was filtered to remove some endogenous

metabolites. TK activity was determined by using enzyme-linked method [4]. Samples were added to a cuvette containing buffer (50 mM Tris/HCl, pH 7.6), 2 mM ribose 5-phosphate, 1 mM xylulose 5-phosphate, 5 mM MgCl2, 0.2 U mL-1 of TPI, 0.2 mM NADH and 0.1 mM TPP. Reactions were initiated by the addition of HeLa or End1/E6E7 cells extract at 37°C. TK activity was expressed as ng product per min per mg total protein. Total protein content of cell extracts was determined by the Bradford method. Each experiment was repeated three times. Cell cycle analysis 104 cells of each group were seeded into a 6-well culture

plate. Then cells were harvested after cultured for 72 hours. The harvested cells were washed with PBS, fixed with 70% alcohol, treated with RNase A and then stained with propidium iodide. The analysis of cell cycle distribution was performed by FAC-Scan Flow Cytometer (Becton Dickinson, USA) and analyzed by CellQuest software package. Each experiment was repeated three times. Cell proliferation assay Cell proliferation Phosphoribosylglycinamide formyltransferase was measured by the MTT assay. HeLa and End1/E6E7 cells (cells without transfection, cells transfected with control plasmid and cells transfected with siRNA), at 2 × 103 per well, were seeded into five 96-well culture plates, respectively. Each plate has three kinds of cells (without transfection, transfected with control plasmid or siRNA plasmid) and each group consisted of 12 parallel wells. Absorption value of one of five culture Belnacasan mw plates was determined by MTT at 490 nm after 24-hour cultivation. Then, absorption value of every culture plate was detected in the following four days. The growth curve of each group was plotted on the basis of absorption values.